| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | 279.41 (cM) |
| QTL Span: | 279.41-279.41 (cM)
49.4-49.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs68934436 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 9.78E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Dutch Warmblood horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina Equine SNP50 BeadChip and analyzed for osteochondrosis traits. A total of 45586 SNPs were used for analysis. |
| Analysis: | A score test of association was used. |
| Software: | GLU, GenABEL, Haplostats |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Orr N, Hill E W, Gu J, Govindarajan P, Conroy J, van Grevenhof E M, Ducro B J, van Arendonk J A M, Knaap J H, van Weeren P R, Machugh D E, Ennis S, Brama P A J |
| Affiliation: | Animal Genomics Laboratory, School of Agriculture and Food Science, University College Dublin, Dublin, Ireland; Section of Veterinary Clinical Sciences, School of Veterinary Medicine, University College Dublin, Dublin, Ireland |
| Title: | Genome-wide association study of osteochondrosis in the tarsocrural joint of Dutch Warmblood horses identifies susceptibility loci on chromosomes 3 and 10 |
| Journal: | Animal genetics, 2013, 44(4): 408-12 |
| Links: |
PubMed | Abstract | List all data
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