QTL Map Information |
Chromosome: | 10 |
QTL Peak Location: | n/a |
QTL Span: | n/a 2.6-2.6 (Mbp) |
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Upper, "Suggestive": | n/a |
Upper, "Significant": | n/a |
Peak: | rs13999491 |
Lower, "Significant": | n/a |
Lower, "Suggestive": | n/a |
Marker type: | SNP |
Analysis type: | Association |
Model tested: | - |
Test base: | Comparison-wise |
Threshold significance level: | Significant |
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P_values | 8.63E-8 | Dominance effect: | n/a |
Additive effect: | n/a |
Associated Gene: | n/a |
Cis/Trans acting type: |  |
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Extended information: |
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QTL Experiment in Brief |
Animals: | Birds were Qinyuan Partridge chickens. |
Breeds associated:
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Design: | Chickens were subjected to whole-genome sequencing, and GWAS were performed for feed intake and efficiency traits. A total of 11,713,037 SNPs were used for analysis. |
Analysis: | A linear mixed model was used. |
Software: | samtools v1.18, GATK v4.4, Beagle v5.4, PLINK v1.90b5.3, GEMMA v0.98.1, GCTA 1.94.0 beta |
Notes: | |
Links: | Edit |
Reference |
Authors: | Ye F, Jie H, Gan J, Liu K, Zhang Z, Xiang H, Liu W, Yin Q, Chen S, Yu H, Li H |
Affiliation: | Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, School of Life Science and Engineering, Foshan University, Foshan 528225, China |
Title: | Genome-wide association analysis of key genes for feed efficiency in Qingyuan Partridge chickens |
Journal: | Poultry science, 2025, 104(2): 104632 |
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PubMed | Abstract | List all data
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