| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
169.1-169.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs13971854 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | An advanced intercross line was derived from two divergent outbred chicken lines: High Quality chicken Line A (HQLA) and Huiyang Bearded (HB) chicken. |
| Breeds associated:
n/a
|
| Design: | Chickens were subjected to either genotyping-by-sequencing or genotyping using the Illumina Chicken 60K BeadChip, and GWAS wwere performed for body weight and shank traits. |
| Analysis: | A mixed linear model was used. |
| Software: | VCFtools v0.1.17, Beagle 5.0, GCTA v1.92, PopLDdecay 3.31 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang Y, Bu L, Cao X, Qu H, Zhang C, Ren J, Huang Z, Zhao Y, Luo C, Hu X, Shu D, Li N |
| Affiliation: | College of Animal Science and Technology, China Agricultural University, Beijing, China |
| Title: | Genetic Dissection of Growth Traits in a Unique Chicken Advanced Intercross Line |
| Journal: | Frontiers in Genetics, 2020, 11: 894 |
| Links: |
PubMed | Abstract | List all data
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