| QTL Map Information |
|---|
| Chromosome: | 27 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
3.3-3.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs731806040 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
LOD_score | 7.51 | | P_values | 3.09E-08 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were female Jingxing yellow chickens. |
| Breeds associated:
n/a
|
| Design: | Animals were subjected to whole-genome sequencing and variant calling prior to GWAS for breast muscle weight. A total of 9,722,764 SNPs were used for analysis. |
| Analysis: | A univariate linear mixed model was used for association analyses. |
| Software: | Samtools, PLINK v1.9, Beagle v5.0, GCTA, ASReml v4.1, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Tan X, Liu L, Liu X, Cui H, Liu R, Zhao G, Wen J |
| Affiliation: | State Key Laboratory of Animal Nutrition, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China |
| Title: | Large-Scale Whole Genome Sequencing Study Reveals Genetic Architecture and Key Variants for Breast Muscle Weight in Native Chickens |
| Journal: | Genes, 2021, 13(1):3 |
| Links: |
PubMed | Abstract | List all data
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