| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
16.6-16.6 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs317875768 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
F_Stat | 15.67 | | P_values | <0.0001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | RAPGEF6 (Rap guanine nucleotide exchange factor 6) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were commercial Chinese Jing Hong chickens. |
| Breeds associated:
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| Design: | Birds were genotyped using the chicken 600K Affymetrix Axiom HD array and analyzed for egg-laying rate. |
| Analysis: | A compressed mixed linear model was used. |
| Software: | TASSEL, R software, Haploview, POPGENE |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Azmal SA, Bhuiyan AA, Omar AI, Ma S, Sun C, Han Z, Zhang M, Zhao S, Li S |
| Affiliation: | Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China |
| Title: | Novel Polymorphisms in RAPGEF6 Gene Associated with Egg-Laying Rate in Chinese Jing Hong Chicken using Genome-Wide SNP Scan |
| Journal: | Genes, 2019, 10(5) |
| Links: |
PubMed | Abstract | List all data
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