| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
16.5-16.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs313619806 |
| Peak: | |
| Lower, "Significant": | rs313547884 |
| Lower, "Suggestive": | n/a |
| Marker type: | SIG of SEL |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Chickens originated from two lines divergently selected for ultimate pH of the pectoralis muscle. |
| Breeds associated:
n/a
|
| Design: | Genomic signatures of selection and QTL for muscle pH were detected. Birds were genotyped using the Illumina ChickenSNP60 BeadChip. A total of 40,590 SNPs were used for analysis. |
| Analysis: | Signatures of selection were detected using the FLK and hapFLK methods. Multi-marker Bayes C(pi) analysis was used for QTL detection. |
| Software: | hapFLK, GS3, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bihan-Duval EL, Hennequet-Antier C, Berri C, Beauclercq SA, Bourin MC, Boulay M, Demeure O, Boitard S |
| Affiliation: | GenPhySE, Université de Toulouse, INRA, ENVT, 31320, Castanet Tolosan, France |
| Title: | Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL |
| Journal: | BMC genomics, 2018, 19(1): 294 |
| Links: |
PubMed | Abstract | List all data
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