| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 49.64 (cM) |
| QTL Span: | 49.64-49.64 (cM)
38.1-38.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs782883081 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.008 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NOTCH1 (notch 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Hanoverian stallions. |
| Breeds associated:
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| Design: | Animals were genotyped for selected SNPs in candidate genes for fertility and analyzed for the paternal component of pregnancy rate per estrus. |
| Analysis: | The general linear model procedure was used. |
| Software: | SAS, TASSEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Schrimpf R, Gottschalk M, Metzger J, Martinsson G, Sieme H, Distl O |
| Affiliation: | Institute for Animal Breeding and Genetics, University of Veterinary Medicine Hannover, Bünteweg 17p, 30559, Hannover, Germany |
| Title: | Screening of whole genome sequences identified high-impact variants for stallion fertility |
| Journal: | BMC genomics, 2016, 17(1): 288 |
| Links: |
PubMed | Abstract | List all data
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