| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | 106.05 (cM) |
| QTL Span: | 106.05-106.05 (cM)
17.8-17.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69083758 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Suggestive |
 |
P_values | <0.10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Thoroughbred horses. |
| Breeds associated:
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| Design: | A two-stage GWAS was performed. For the first stage, animals were genotyped using the Illumina EquineSNP50 BeadChip. For the second stage, a larger number of animals were genotyped for 158 SNPs chosen based on the results of the first stage. |
| Analysis: | Linear regression analyses were performed. |
| Software: | PLINK, Haploview, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Shin DH, Lee JW, Park JE, Choi IY, Oh HS, Kim HJ, Kim H |
| Affiliation: | Department of Agricultural Biotechnology, Animal Biotechnology Major, and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, Korea |
| Title: | Multiple Genes Related to Muscle Identified through a Joint Analysis of a Two-stage Genome-wide Association Study for Racing Performance of 1,156 Thoroughbreds |
| Journal: | Asian-Australasian Journal of Animal Sciences, 2015, 28(6):771-81 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | race time EBV |
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