| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 115.99 (cM) |
| QTL Span: | 115.86-116.12 (cM)
62.2-62.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69127725 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.001454 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #32135
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Thoroughbred horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP50 BeadChip and for a previously detected SNP in MSTN and analyzed for optimum racing distance. |
| Analysis: | Cohort-based association and quantitative trait association tests were performed using chi-square and linear regression. |
| Software: | PLINK, Haploview, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hill EW, McGivney BA, Gu J, Whiston R, Machugh DE |
| Affiliation: | Animal Genomics Laboratory, School of Agriculture, Food Science and Veterinary Medicine, University College Dublin, Belfield, Dublin 4, Ireland |
| Title: | A genome-wide SNP-association study confirms a sequence variant (g.66493737C>T) in the equine myostatin (MSTN) gene as the most powerful predictor of optimum racing distance for Thoroughbred racehorses |
| Journal: | BMC genomics, 2010, 11: 552 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #20932346
Add your comments
Note similar findings
Note contradictions
|
