| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
79.5-79.5 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs1139103739 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.60E-3 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | KIT (KIT proto-oncogene receptor tyrosine kinase) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
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| Animals: | Animals were 27 horses from stock-type breeds (Paint and Quarter Horse) from a single extended family. A set of 82 horses (stock-type, Arabian, Warmblood) was used for comparison. |
| Breeds associated:
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| Design: | Animals were genotyped for six variants in the KIT gene, and association analysis was performed for white spotting score. |
| Analysis: | A Pearson correlation test was used. |
| Software: | SPSS v28 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | McFadden A, Martin K, Foster G, Vierra M, Lundquist EW, Everts RE, Martin E, Volz E, McLoone K, Brooks SA, Lafayette C |
| Affiliation: | Etalon Inc, Menlo Park, CA |
| Title: | 5'UTR Variant in KIT Associated With White Spotting in Horses |
| Journal: | Journal of equine veterinary science, 2023, 127: 104563 |
| Links: |
PubMed | Abstract | List all data
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