Release 56
(Apr 24, 2025)

QTL 315756 Description:

 Trait Information
Trait name: White markings Vertebrate Trait Ontology: Coat/hair pigmentation trait
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: WHIMAR Clinical Measurement Ontology: Coat/hair color measurement
 QTL Map Information
Chromosome:3
QTL Peak Location:n/a
QTL Span:n/a
79.5-79.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:-
Threshold significance level:-
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:KIT (KIT proto-oncogene receptor tyrosine kinase)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:The animal was a New Zealand Standardbred filly with a sabino-like white spotting pattern.
     Breeds associated:
    Design:The KIT gene was investigated as a cause of the white spotting pattern.
    Analysis:The filly was genotyped for all known white patterning variants in the KIT gene, and KIT coding sequence was analyzed to identify novel variants.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Esdaile E, Till B, Kallenberg A, Fremeux M, Bickel L, Bellone RR
    Affiliation:Veterinary Genetics Laboratory, School of Veterinary Medicine, University of California-Davis, Davis, California, USA
    Title:A de novo missense mutation in KIT is responsible for dominant white spotting phenotype in a Standardbred horse
    Journal:Animal Genetics, 2022, 53(4): 534-537
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #35641888
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  • Cite this Data:

    Animal QTLdb: QTL315756 was published in 2022, and was curated into QTLdb on 2025-04-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:315756

     

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