| QTL Map Information |
|---|
| Chromosome: | 24 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
18.4-18.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69394793 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | DPF3 (double PHD fingers 3) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Lipizzan horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Affymetrix Axiom Equine Genotyping array and GWAS was performed for melanoma etiopathogenesis. A total of 429,896 SNPs were used for analysis. |
| Analysis: | A linear regression model was used. |
| Software: | SAS, PLINK 1.07, qqman in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Druml T, Brem G, Horna M, Ricard A, Grilz-Seger G |
| Affiliation: | Institute of animal breeding and genetics, University of Veterinary sciences Vienna, Vienna, Austria |
| Title: | DPF3, A Putative Candidate Gene For Melanoma Etiopathogenesis in Gray Horses |
| Journal: | Journal of equine veterinary science, 2022, 108: 103797 |
| Links: |
PubMed | Abstract | List all data
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