| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 115.99 (cM) |
| QTL Span: | 115.86-116.12 (cM)
62.2-62.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69192319 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.70E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Thoroughbred racehorses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina Equine SNP50 BeadChip and analyzed for distal limb fractures. A total of 43417 SNPs were used for analysis. |
| Analysis: | The Cochran-Mantel-Haenszel association test was used. |
| Software: | PLINK, Haploview, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Blott SC, Swinburne JE, Sibbons C, Fox-Clipsham LY, Helwegen M, Hillyer L, Parkin TDH, Newton JR, Vaudin M |
| Affiliation: | Centre for Preventive Medicine, Animal Health Trust, Lanwades Park, Kentford, Newmarket, Suffolk CB8 7UU, UK |
| Title: | A genome-wide association study demonstrates significant genetic variation for fracture risk in Thoroughbred racehorses |
| Journal: | BMC genomics, 2014, 15: 147 |
| Links: |
PubMed | Abstract | List all data
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