| QTL Map Information |
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| Chromosome: | 23 |
| QTL Peak Location: | 63.31 (cM) |
| QTL Span: | 63.31-63.31 (cM)
45.6-45.6 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69338275 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.02E-13 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LINGO2 (leucine rich repeat and Ig domain containing 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were feral Andean horses and Iberian (Andalusian, Lipizzaner) horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Equine SNP50 BeadChip in order to identify candidate genes for altitude adaptation. A total of 50023 SNPs were included in the analysis. |
| Analysis: | Fisher's exact test was used. |
| Software: | PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hendrickson Sher L |
| Affiliation: | Department of Biology, Shepherd University, Shepherdstown WV 25443, USA |
| Title: | A genome wide study of genetic adaptation to high altitude in feral Andean Horses of the paramo. |
| Journal: | BMC evolutionary biology, 2013, 13: 273 |
| Links: |
PubMed | Abstract | List all data
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