| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
107.2-107.2 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs68601376 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Warmblood horses of the following breeds: Holstein, Oldenburg, Trakehner, and Westfalian. |
| Breeds associated:
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| Design: | Animals were genotyped using either the GGPEquine 70K Beadchip or the GGP Equine Plus BeadChip, and GWAS was performed for withers height. The final dataset included 62,070 SNPs. |
| Analysis: | GWAS was performed using a leave-one-chromosome-out approach with a mixed linear model. |
| Software: | PLINK, Beagle 5.0, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Vosgerau S, Krattenmacher N, Falker-Gieske C, Seidel A, Tetens J, Stock KF, Nolte W, Wobbe M, Blaj I, Reents R, Kühn C, von Depka Prondzinski M, Kalm E, Thaller G |
| Affiliation: | Institute of Animal Breeding and Husbandry, Kiel University, Olshausenstr. 40, 24098, Kiel, Germany |
| Title: | Genetic and genomic characterization followed by single-step genomic evaluation of withers height in German Warmblood horses |
| Journal: | Journal of Applied Genetics, 2022, 63(2):369-378 |
| Links: |
PubMed | Abstract | List all data
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