| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
79.5-79.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.00 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | KIT (KIT proto-oncogene receptor tyrosine kinase) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Barb/Berber horses. |
| Breeds associated:
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| Design: | A stallion and two offspring exhibiting over 90% skin depigmentation were analyzed for the presence of variants in the KIT gene. |
| Analysis: | Sanger sequencing was performed and reported variants were analyzed for functional impact and compared to previously published variants. |
| Software: | PROVEAN, SIFT, POLYPHEN-2, I-TASSER |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Martin K, Patterson Rosa L, Vierra M, Foster G, Brooks SA, Lafayette C |
| Affiliation: | Etalon, Inc., Menlo Park, CA, 94025, USA |
| Title: | De novo mutation of KIT causes extensive coat white patterning in a family of Berber horses |
| Journal: | Animal Genetics, 2021, 52(1): 135-137 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | extensive white patterning |
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