| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
79.5-79.5 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs1136290549 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | KIT (KIT proto-oncogene receptor tyrosine kinase) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Noriker horses. |
| Breeds associated:
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| Design: | Animals were previously genotyped for 670K SNPs. GWAS was carried out for roan coat color using a total of 464,880 SNPs. |
| Analysis: | A case-control design was used. |
| Software: | PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Grilz-Seger G, Reiter S, Neuditschko M, Wallner B, Rieder S, Leeb T, Jagannathan V, Mesarič M, Cotman M, Pausch H, Lindgren G, Velie B, Horna M, Brem G, Druml T |
| Affiliation: | Lipizzan stud farm of Piber, Köflach, Austria |
| Title: | A Genome-Wide Association Analysis in Noriker Horses Identifies a SNP Associated With Roan Coat Color |
| Journal: | Journal of equine veterinary science, 2020, 88: 102950 |
| Links: |
PubMed | Abstract | List all data
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