| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
2.1-2.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs1149744811 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Suggestive |
 |
FDR | <0.10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Quarter Horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Affymetrix Axiom Equine Genotyping Array and analyzed for equine neuroaxonal dystrophy incidence. A total of 488,210 SNPs were used for analysis. |
| Analysis: | A genome-wide efficient mixed-model analysis (GEMMA) was performed. |
| Software: | PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hales EN, Esparza C, Peng S, Dahlgren AR, Peterson JM, Miller AD, Finno CJ |
| Affiliation: | Department of Population, Health and Reproduction, University of California, Davis School of Veterinary Medicine, Davis, CA 95616, USA. |
| Title: | Genome-Wide Association Study and Subsequent Exclusion of ATCAY as a Candidate Gene Involved in Equine Neuroaxonal Dystrophy Using Two Animal Models. |
| Journal: | Genes, 2020, 11(1):E82 |
| Links: |
PubMed | Abstract | List all data
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