| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 19.92 (cM) |
| QTL Span: | 19.92-19.92 (cM)
15.0-15.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs394494462 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Standardbred trotters or pacers. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Ilumina EquineSNP50 (data imputed to 70K) or EquineSNP70 chip and analyzed for pacing ability. A total of 62,901 SNPs were used for analysis. |
| Analysis: | Mixed models were used. |
| Software: | PLINK, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | McCoy AM, Beeson SK, Rubin CJ, Andersson L, Caputo P, Lykkjen S, Moore A, Piercy RJ, Mickelson JR, McCue ME |
| Affiliation: | Veterinary Population Medicine Department, University of Minnesota, St. Paul, Minnesota, United States of America |
| Title: | Identification and validation of genetic variants predictive of gait in standardbred horses |
| Journal: | PLoS genetics, 2019, 15(5): e1008146 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Sequenom assay based on regions of interest |
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