| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
107.2-107.7 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs68603009 |
| Peak: | |
| Lower, "Significant": | rs68534803 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Thoroughbred horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina EquineSNP70 BeadChip and analyzed for recurrent laryngeal neuropathy incidence and body height. A total of 56,679 SNPs were used for analysis. |
| Analysis: | Association analysis was performed by means of a Wald test using the centered relatedness matrix calculated by GEMMA. |
| Software: | GEMMA, ShapeIT v2, Haploview, PLINK, R package stats |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Boyko AR, Brooks SA, Behan-Braman A, Castelhano M, Corey E, Oliveira KC, Swinburne JE, Todhunter RJ, Zhang Z, Ainsworth DM, Robinson NE |
| Affiliation: | Department of Large Animal Clinical Sciences, Michigan State University, East Lansing, MI 48824, USA |
| Title: | Genomic analysis establishes correlation between growth and laryngeal neuropathy in Thoroughbreds |
| Journal: | BMC genomics, 2014, 15: 259 |
| Links: |
PubMed | Abstract | List all data
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