| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 117.67 (cM) |
| QTL Span: | 117.67-117.67 (cM)
69.3-69.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69003503 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.989E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #135440
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were registered Arabian horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP50 Genotyping BeadChip and analyzed for traits related to equine metabolic syndrome. A total of 39,681 SNPs were used for analysis. |
| Analysis: | Association was evaluated using ANOVA or 1-tailed Student's t-test. |
| Software: | PLINK, JMP 12 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lewis S L, Holl H M, Streeter C, Posbergh C, Schanbacher B J, Place N J, Mallicote M F, Long M T, Brooks S A |
| Affiliation: | Department of Animal Sciences, University of Florida, Gainesville 32611, USA |
| Title: | Genomewide association study reveals a risk locus for equine metabolic syndrome in the Arabian horse |
| Journal: | Journal of animal science, 2017, 95(3): 1071-1079 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #28380523
Add your comments
Note similar findings
Note contradictions
|
