| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 426.45 (cM) |
| QTL Span: | 426.45-426.45 (cM)
107.2-107.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs68601376 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Tennessee Walking Horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina EquineSNP70 BeadChip and analyzed for skeletal size traits. A total of 39,262 SNPs were used for analysis. To refine and validate the results, a custom 115-SNP array was also used. |
| Analysis: | Mixed linear models were used. |
| Software: | Golden Helix SVS 8, Haploview, PLINK, JMP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Staiger E A, Al Abri M A, Pflug K M, Kalla S E, Ainsworth D M, Miller D, Raudsepp T, Sutter N B, Brooks S A |
| Affiliation: | Department of Animal Science, University of Florida, Gainesville, Florida |
| Title: | Skeletal variation in Tennessee Walking Horses maps to the LCORL/NCAPG gene region |
| Journal: | Physiological genomics, 2016, 48(5): 325-35 |
| Links: |
PubMed | Abstract | List all data
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