Release 56
(Apr 24, 2025)

QTL 119852 Description:

 Trait Information
Trait name: Osteochondrosis Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: OSTEO Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:4
QTL Peak Location:211.10 (cM)
QTL Span:211.10-211.10 (cM)
38.1-38.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs69595660
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
P_values0.009
Dominance effect:n/a
Additive effect:n/a
Associated Gene:COL1A2 (collagen type I alpha 2 chain)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Spanish purebred (Andalusian) horses.
     Breeds associated:
    Design:Animals were genotyped for 48 selected SNPs and analyzed for osteochondrosis incidence.
    Analysis:Linear regression analysis was used.
    Software:LME4 in R
    Notes: 
    Links:Edit

     Reference
    Authors:Sevane N, Dunner S, Boado A, Cañon J
    Affiliation:Departamento de Producción Animal, Facultad de Veterinaria, Universidad Complutense, Madrid, 28040, Spain
    Title:Candidate gene analysis of osteochondrosis in Spanish Purebred horses
    Journal:Animal genetics, 2016, 47(5): 570-8
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Total OC lesions
    User inputs on reference #27422688
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  • Cite this Data:

    Animal QTLdb: QTL119852 was published in 2016, and was curated into QTLdb on 2016-10-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:119852

     

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