| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 33.22 (cM) |
| QTL Span: | 33.22-33.22 (cM)
25.5-25.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69314194 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.69E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | STOM (stomatin) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Tennessee Walking Horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP70 BeadChip and analyzed for temperament traits. |
| Analysis: | Linear mixed model analysis was performed. |
| Software: | Golden Helix SVS 8, Haploview, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Staiger E A, Albright J D, Brooks S A |
| Affiliation: | Department of Animal Science, University of Florida, Gainesville, FL, USA |
| Title: | Genome-wide association mapping of heritable temperament variation in the Tennessee Walking Horse |
| Journal: | Genes, brain, and behavior, 2016, 15(5): 514-26 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | factor 3-agonistic |
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