| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 49.64 (cM) |
| QTL Span: | 49.64-49.64 (cM)
10.4-10.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69392915 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.83E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Tennessee Walking Horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP70 BeadChip and analyzed for gait type variation. A total of 42,226 SNPs were used for analysis. |
| Analysis: | Case-control allelic association and basic adaptive permutation were applied. |
| Software: | PLINK, SVS software, JMP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Staiger E A, Abri M A, Silva C A S, Brooks S A |
| Affiliation: | Department of Animal Science, Cornell University, Ithaca, NY 14853; Department of ANimal Science, University of Florida, Gainesville 32611 |
| Title: | Loci impacting polymorphic gait in the Tennessee Walking Horse |
| Journal: | Journal of animal science, 2016, 94(4): 1377-86 |
| Links: |
PubMed | Abstract | List all data
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