| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 77.72 (cM) |
| QTL Span: | 77.72-77.72 (cM)
9.0-9.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69216416 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 18.5 | | P_values | 0.041 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Warmblood stallions. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP50 BeadChip and analyzed for semen quality traits. A total of 53,411 SNPs were used for analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | PLINK, SAS, TASSEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gottschalk M, Metzger J, Martinsson G, Sieme H, Distl O |
| Affiliation: | Institute for Animal Breeding and Genetics, University of Veterinary Medicine Hannover (Foundation), Hannover, Germany |
| Title: | Genome-wide association study for semen quality traits in German Warmblood stallions |
| Journal: | Animal reproduction science, 2016, 171: 81-6 |
| Links: |
PubMed | Abstract | List all data
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