| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 23.2 (cM) |
| QTL Span: | 27.48-27.68 (cM)
21.4-21.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Suggestive |
 |
P_values | <0.08 | | Dominance effect: | n/a |
| Additive effect: | -1.10 |
| Associated Gene: | NOD2 (nucleotide-binding oligomerization domain containing 2) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | The animals were Holstein bulls from a resource population selected for extreme EBV for either protein yield or somatic cell score. |
| Breeds associated:
|
| Design: | Animals were genotyped for four SNPs in CARD15/NOD2 and analyzed for milk trait EBVs. |
| Analysis: | A regression model was used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Pant, S D; Schenkel, F S; Leyva-Baca, I; Sharma, B S; Karrow, N A |
| Affiliation: | Centre for Genetic Improvement of LIvestock, Department of Animal and Poultry Science, University of Guelph, Guelph, Ontario, N1G 2W1, Canada |
| Title: | Identification of single nucleotide polymorphisms in bovine CARD15 and their associations with health and production traits in Canadian Holsteins. |
| Journal: | BMC genomics, 2007, 8: 421 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | c.3020A>T; EBV |
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