Release 56
(Apr 24, 2025)

QTL 95883 Description:

 Trait Information
Trait name: Insulin-like growth factor 1 level Vertebrate Trait Ontology: n/a
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: IGFI Clinical Measurement Ontology: Serum insulin-like growth factor 1 level
 QTL Map Information
Chromosome:5
QTL Peak Location:67 (cM)
QTL Span:38.37-38.57 (cM)
34.0-34.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0008
Dominance effect:-4.531
Additive effect:72.770
Associated Gene:IGF1 (insulin-like growth factor 1 (somatomedin C))
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Hanwoo cattle.
     Breeds associated:
    Design:Animals were genotyped for one SNP and one repeat variant in the IGF1 gene and analyzed for IGF1 protein concentration.
    Analysis:ANOVA was conducted using the general linear model procedure.
    Software:SAS, Arlequin
    Notes: 
    Links:Edit

     Reference
    Authors:Chung H Y, Choi Y J, Park H N, Davis M E
    Affiliation:Animal Genomics and Bioinformatics Division, National Institute of Animal Science, Suwon, Korea; Department of Animal Sciences, Ohio State University, Columbus, OH, USA
    Title:Associations between genetic variants in the promoter region of the insulin-like growth factor-1 (IGF1) gene and blood serum IGF1 concentration in Hanwoo cattle
    Journal:Genetics and molecular research : GMR, 2015, 14(2): 3026-35
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:g.323C>A
    User inputs on reference #25966067
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  • Cite this Data:

    Animal QTLdb: QTL95883 was published in 2015, and was curated into QTLdb on 2016-05-10. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:95883

     

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