| QTL Map Information |
|---|
| Chromosome: | 21 |
| QTL Peak Location: | 42.05 (cM) |
| QTL Span: | 42.05-42.05 (cM)
33.3-33.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42325871 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SNUPN (snurportin 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Korean cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for marbling score. A total of 39,092 SNPs were used for analysis. |
| Analysis: | Mixed models were used. |
| Software: | GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ryu J, Lee C |
| Affiliation: | Department of Bioinformatics and Life Science, Soongsil University, 369 Sangdo-ro, Dongjak-gu, Seoul 156-743, Republic of Korea |
| Title: | Genetic association of marbling score with intragenic nucleotide variants at selection signals of the bovine genome |
| Journal: | Animal : an international journal of animal bioscience, 2016, 10(4): 566-70 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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