Release 56
(Apr 24, 2025)

QTL 95236 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:19
QTL Peak Location:92.57 (cM)
QTL Span:92.57-92.57 (cM)
50.8-50.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110562092
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
PostProbInc0.989
VARIANCE7.18
Dominance effect:n/a
Additive effect:n/a
Associated Gene:ACACA (acetyl-CoA carboxylase alpha)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Brown Swiss cows.
     Breeds associated:
    Design:Animals were genotyped for 96 SNPs in 54 candidate genes and tested for SNP association with milk traits.
    Analysis:A Bayesian linear animal model was used.
    Software:Genepop
    Notes: 
    Links:Edit

     Reference
    Authors:Cecchinato A, Ribeca C, Chessa S, Cipolat-Gotet C, Maretto F, Casellas J, Bittante G
    Affiliation:Department of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Viale dell'Università 16, 35020 Legnaro, Italy
    Title:Candidate gene association analysis for milk yield, composition, urea nitrogen and somatic cell scores in Brown Swiss cows.
    Journal:Animal : an international journal of animal bioscience, 2014, 8(7): 1062-70
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #24804775
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  • Cite this Data:

    Animal QTLdb: QTL95236 was published in 2014, and was curated into QTLdb on 2016-04-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:95236

     

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