| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 62.56 (cM) |
| QTL Span: | 62.56-62.56 (cM)
64.5-64.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43235106 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.81E-05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | MAATS1 (MYCBP-associated, testis expressed 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were mature Holstein bulls. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip version 1 or 2 and analyzed for semen quality traits. A total of 41,188 SNPs were used for analysis. |
| Analysis: | A compressed mixed linear model was used. |
| Software: | SAS, DMU, GAPIT |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Qin C, Yin H, Zhang X, Sun D, Zhang Q, Liu J, Ding X, Zhang Y, Zhang S |
| Affiliation: | College of Animal Science and Technology, Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, China Agricultural University, Beijing 100193, China |
| Title: | Genome wide association study for semen production traits in Holstein bull population in China |
| Journal: | Animal Genetics, 2016, |
| Links: |
No PubMed entry | Abstract | List all data
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