| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 44.32 (cM) |
| QTL Span: | 44.32-44.32 (cM)
38.3-38.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs135596096 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #61983
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brangus, Simbrah, Braford, Angus, Red Angus, Simmental, and crossbred cattle. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped for 89 SNPs identified as significant in a previous GWAS, and analysis was performed for association with reproductive success. |
| Analysis: | Associations were tested using Fisher's exact test. |
| Software: | Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Psaros K M, McDaneld T G, Kuehn L A, Snelling W M, Keele J W |
| Affiliation: | North Carolina State University, Dept. of Animal Science, Raleigh 27695; USDA, ARS, US Meat Animal Research Center, Clay Center, NE 68933 |
| Title: | Evaluation of single nucleotide polymorphisms in chromosomal regions impacting pregnancy status in cattle |
| Journal: | Journal of animal science, 2015, 93(3): 978-87 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #26020876
Add your comments
Note similar findings
Note contradictions
|
