| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 12.33 (cM) |
| QTL Span: | 12.33-12.33 (cM)
7.7-7.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109629628 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0359 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PMM2 (phosphomannomutase 2 ) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein bulls. |
| Breeds associated:
|
| Design: | Semen samples were genotyped for 434 SNPs in candidate genes related to reproductive processes and analyzed for production and fertility traits. |
| Analysis: | Mixed models were used. |
| Software: | SAS, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Cochran SD, Cole JB, Null DJ, Hansen PJ |
| Affiliation: | Department of Animal Sciences, D.H. Barron Reproductive and Perinatal Biology Research Program, and Genetics Institute, University of Florida, Gainesville, FL 32611-0910, USA |
| Title: | Discovery of single nucleotide polymorphisms in candidate genes associated with fertility and production traits in Holstein cattle |
| Journal: | BMC genetics, 2013, 14: 49 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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