| QTL Map Information |
|---|
| Chromosome: | 17 |
| QTL Peak Location: | 11.04 (cM) |
| QTL Span: | 11.04-11.04 (cM)
8.4-8.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42315069 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Holstein Friesian cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk production traits over different lactations. A total of 44,962 SNPs were used for analysis. |
| Analysis: | Wilmink curve parameters were used to assess the genetic effects over the course of a lactation, and test-day yield deviations were used as a normative approach for GWAS. |
| Software: | SAS, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Strucken E M, Bortfeldt R H, de Koning D J, Brockmann G A |
| Affiliation: | Breeding Biology and Molecular Genetics, Department for Crop and Animal Sciences, Faculty of Agriculture and Horticulture, Humboldt-Universität zu Berlin, Germany |
| Title: | Genome-wide associations for investigating time-dependent genetic effects for milk production traits in dairy cattle |
| Journal: | Animal genetics, 2012, 43(4): 375-82 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Test-day yield deviation; lactation 1 |
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