Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 4979 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:8
QTL Peak Location:41.4 (cM)
QTL Span:31.42-41.60 (cM)
27.7-36.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":BMS1591
Peak:
Lower, "Significant":BMS678
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
P_values0.034
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #4979
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  •  QTL Experiment in Brief
    Animals:Animals were Danish Holstein.
     Breeds associated:
    Design:A granddaughter design was employed. Animals were genotyped for 356 microsatellite markers and analyzed for mastitis, udder, and milk production traits.
    Analysis:A series of analyses was used, including regression models and variance component analysis.
    Software:GDQTL
    Notes: 
    Links:Edit

     Reference
    Authors:Lund, M S; Guldbrandtsen, B; Buitenhuis, A J; Thomsen, B; Bendixen, C
    Affiliation:University of Aarhus, Faculty of Agricultural Sciences, Department of Genetics and Biotechnology, Research Center Foulum, Tjele, Denmark; Viking Genetics, Assentoft, Randers, Denmark
    Title:Detection of quantitative trait loci in Danish Holstein cattle affecting clinical mastitis, somatic cell score, udder conformation traits, and assessment of associated effects on milk yield.
    Journal:Journal of dairy science, 2008, 91 (10): 4028-36
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #18832229
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  • Cite this Data:

    Animal QTLdb: QTL4979 was published in 2008, and was curated into QTLdb on 2011-01-26. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:4979

     

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