Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 4884 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:14
QTL Peak Location:62.6 (cM)
QTL Span:60.68-35.09 (cM)
48.1-27.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":BMS740
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
LikelihoodR9.5
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #4884
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  •  QTL Experiment in Brief
    Animals:Three cattle breeds were used: Finnish Ayrshire, Swedish Red and White, and Danish Red.
     Breeds associated:
    n/a
    Design:Animals were genotyped for 61 microsatellite markers, and data were collected for clinical mastitis and somatic cell score.
    Analysis:Linear regression analysis was used, followed by variance component analyses.
    Software:CRI-MAP
    Notes: 
    Links:Edit

     Reference
    Authors:Lund, M S; Sahana, G; Andersson-Eklund, L; Hastings, N; Fernandez, A; Schulman, N; Thomsen, B; Viitala, S; Williams, J L; Sabry,
    Affiliation:University of Aarhus, Tjele, Denmark; Swedish University of Agricultural Sciences, Uppsala, Sweden; Roslin Institute, Roslin, Midlothian, UK; MTT, Agrifood Research Finland, Jokioinen, Finland; Institute of Veterinary Medicine and An
    Title:Joint analysis of quantitative trait loci for clinical mastitis and somatic cell score on five chromosomes in three Nordic dairy cattle breeds.
    Journal:Journal of dairy science, 2007, 90 (11): 5282-90
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #17954769
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  • Cite this Data:

    Animal QTLdb: QTL4884 was published in 2007, and was curated into QTLdb on 2011-01-27. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:4884

     

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