Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 4561 Description:

 Trait Information
Trait name: M. paratuberculosis susceptibility Vertebrate Trait Ontology: n/a
Reported name: M. paratuberculosis susceptibility Product Trait Ontology: n/a
Symbol: MPARA Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:20
QTL Peak Location:5 (cM)
QTL Span:0.63-12.44 (cM)
0.5-10.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":MB068
Peak:
Lower, "Significant":DIK5273
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:Chromosome-wise
Threshold significance level:n/a
F_Stat6.32
P_values0.0319
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #4561
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  •  QTL Experiment in Brief
    Animals:Holstein cattle were used.
     Breeds associated:
    n/a
    Design:A daughter design was employed. Sires were genotyped for 291 microsatellite markers, and cows from 12 half-sib sire families were sampled for M. paratuberculosis testing.
    Analysis:A linear regression model was utilized.
    Software:GeneMarker, CRIMAP, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Gonda, M G; Kirkpatrick, B W; Shook, G E; Collins, M T
    Affiliation:Dairy Science Department, Animal Sciences Department, and Pathobiological Sciences Department, University of Wisconsin, Madison, WI 53706, US
    Title:Identification of a QTL on BTA20 affecting susceptibility to Mycobacterium avium ssp. paratuberculosis infection in US Holsteins.
    Journal:Animal genetics, 2007, 38 (4): 389-96
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #17617211
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  • Cite this Data:

    Animal QTLdb: QTL4561 was published in 2007, and was curated into QTLdb on 2009-03-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:4561

     

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