Release 56
(Apr 24, 2025)

QTL 37584 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: Subcutaneous fat Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:13
QTL Peak Location:74.88 (cM)
QTL Span:74.88-74.88 (cM)
62.2-62.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs135724333
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:DNMT3B (DNA (cytosine-5-)-methyltransferase 3 beta)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Snow Dragon beef cattle (offspring of Wagyu and F1 crossbred of Limousin by Fuzhou Yellow).
     Breeds associated:
    n/a
    Design:Animals were genotyped for 15 SNPs in 7 genes and analyzed for beef quality and carcass traits.
    Analysis:The general linear model procedure was used.
    Software:SAS, PopGene
    Notes: 
    Links:Edit

     Reference
    Authors:Liu X, Usman T, Wang Y, Wang Z, Xu X, Wu M, Zhang Y, Zhang X, Li Q, Liu L, Shi W, Qin C, Geng F, Wang C, Tan R, Huang X, Liu A, Wu H, Tan S, Yu Y
    Affiliation:Key Laboratory of Agricultural Animal Genetics and Breeding, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China
    Title:Polymorphisms in epigenetic and meat quality related genes in fourteen cattle breeds and association with beef quality and carcass traits
    Journal:Asian-Australasian journal of animal sciences, 2015, 28(4): 467-75
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #25656186
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  • Cite this Data:

    Animal QTLdb: QTL37584 was published in 2015, and was curated into QTLdb on 2015-04-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:37584

     

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