| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 79.8 (cM) |
| QTL Span: | 86.30-86.50 (cM)
50.0-50.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | FASN (fatty acid synthase) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Japanese Black cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50v2 BeadChip and for 5 SNPs in FASN and analyzed for fatty acid composition. |
| Analysis: | Genome-wide rapid association using mixed model and regression (GRAMMAR) was performed. |
| Software: | PLINK, Haploview, JMP, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hayakawa K, Sakamoto T, Ishii A, Yamaji K, Uemoto Y, Sasago N, Kobayashi E, Kobayashi N, Matsuhashi T, Maruyama S, Matsumoto H, Oyama K, Mannen H, Sasazaki S |
| Affiliation: | Laboratory of Animal Breeding and Genetics, Graduate School of Agricultural Science, Kobe University, Kobe, Hyogo, Japan |
| Title: | The g.841G>C SNP of FASN gene is associated with fatty acid composition in beef cattle |
| Journal: | Animal science journal, 2015, 86(8):737-46 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | g.841G>C |
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