| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 101.89 (cM) |
| QTL Span: | 101.89-101.89 (cM)
107.0-107.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109923296 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 7.16E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NHEJ1 (nonhomologous end-joining factor 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were cross-bred cattle with unknown pedigree. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for infection with persistent bovine viral diarrhea virus. |
| Analysis: | Mixed models were used. |
| Software: | R software, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Casas E, Hessman B E, Keele J W, Ridpath J F |
| Affiliation: | National Animal Disease Center, ARS, USDA, Ames, IA, USA |
| Title: | A genome-wide association study for the incidence of persistent bovine viral diarrhea virus infection in cattle |
| Journal: | Animal genetics, 2015, 46(1): 8-15 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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