Release 56
(Apr 24, 2025)

QTL 36306 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score (EBV) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:16
QTL Peak Location:94.60 (cM)
QTL Span:94.60-94.60 (cM)
75.6-75.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41634826
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CD46 (CD46 molecule, complement regulatory protein)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped for one SNP in CD46 and analyzed for udder health traits.
    Analysis:A least squares method, t-test, and ANOVA were used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Wang X, Zhong J, Gao Y, Ju Z, Huang J
    Affiliation:Dairy Cattle Research Center, Shandong Academy of Agricultural Sciences, No,159 North of Industry Road, Jinan, Shandong 250131, China
    Title:A SNP in intron 8 of CD46 causes a novel transcript associated with mastitis in Holsteins
    Journal:BMC genomics, 2014, 15: 630
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #25070150
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  • Cite this Data:

    Animal QTLdb: QTL36306 was published in 2014, and was curated into QTLdb on 2015-02-25. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:36306

     

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