| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 100.39 (cM) |
| QTL Span: | 100.20-100.30 (cM)
83.1-83.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs41594373 |
| Peak: | |
| Lower, "Significant": | rs109511741 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for somatic cell score DYD. A total of 44,576 SNPs were used for analysis. |
| Analysis: | Linear regression was used. |
| Software: | PLINK, Haploview, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Abdel-Shafy H, Bortfeldt RH, Tetens J, Brockmann GA |
| Affiliation: | Department for Crop and Animal Sciences, Humboldt-Universitat zu Berlin, Berlin, Germany |
| Title: | Single nucleotide polymorphism and haplotype effects associated with somatic cell score in German Holstein cattle |
| Journal: | Genetics, Selection, Evolution : GSE, 2014, 46: 35 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | DYD |
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