| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 89.53 (cM) |
| QTL Span: | 89.53-89.53 (cM)
85.3-85.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42518463 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 5.66 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nellore cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Illumina BovineHD BeadChip or the BovineSNP50 v2 BeadChip and analyzed for average daily gain. A total of 290,620 SNPs were used for analysis. |
| Analysis: | An extension of the genome-wide rapid association using mixed model and regression method (GRAMMAR-Gamma) was used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Santana M H A, Utsunomiya Y T, Neves H H R, Gomes R C, Garcia J F, Fukumasu H, Silva S L, Leme P R, Coutinho L L, Eler J P, Ferraz J B S |
| Affiliation: | Faculdade de Zootecnia e Engenharia de Alimentos, USP - Univ. de São Paulo, Pirassununga, Brazil |
| Title: | Genome-wide association study for feedlot average daily gain in Nellore cattle (Bos indicus) |
| Journal: | Journal of animal breeding and genetics, 2014, 131(3): 210-6 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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