Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 3175 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:1
QTL Peak Location:51.01 (cM)
QTL Span:24.03-24.23 (cM)
24.6-24.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:TGLA57
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
F_Stat3.67
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #3175
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  •  QTL Experiment in Brief
    Animals:Animals were Finnish Ayrshire.
     Breeds associated:
    n/a
    Design:A granddaughter design was used. Animals were genotyped for 148 microsatellite markers and analyzed for health traits.
    Analysis:A multiple marker regression model was employed.
    Software:ANIMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Schulman NF, Viitala SM, de Koning DJ, Virta J, Maki-Tanila A, Vilkki JH.
    Affiliation:MTT, Agrifood Research Finland, Animal Breeding, FIN-31600 Jokioinen, Finland.nina.schulman@mtt.fi
    Title:Quantitative trait loci for health traits in Finnish Ayrshire cattle.
    Journal:J Dairy Sci, 2004, 87(2):443-9.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #14762087
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  • Cite this Data:

    Animal QTLdb: QTL3175 was published in 2004, and was curated into QTLdb on 2007-01-05. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:3175

     

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