| QTL Map Information |
|---|
| Chromosome: | 27 |
| QTL Peak Location: | 4.83 (cM) |
| QTL Span: | 4.83-4.83 (cM)
3.8-3.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109822265 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.05E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LOC101904868 (CUB and sushi domain-containing protein 1-like) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #31749
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Canchim cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for body weights (birth, weaning, and long-yearling). A total of 672,778 SNPs were used for analysis. |
| Analysis: | The Generalized Quasi-Likelihood Score (GQLS) method with logistic regression was used. |
| Software: | SLEUTH |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Buzanskas ME, Grossi DA, Ventura RV, Schenkel FS, Sargolzaei M, Meirelles SLC, Mokry FB, Higa RH, Mudadu MA, da Silva MVG, Niciura SCM, Júnior RAA, Alencar MM, Regitano LCA, Munari DP |
| Affiliation: | Departamento de Ciências Exatas, UNESP - Univ Estadual Paulista, Faculdade de Ciências Agrárias e Veterinárias, Jaboticabal, São Paulo, Brazil |
| Title: | Genome-wide association for growth traits in Canchim beef cattle |
| Journal: | PloS one, 2014, 9(4): e94802 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Long-yearling weight |
User inputs on reference #24733441
Add your comments
Note similar findings
Note contradictions
|
