| QTL Map Information |
|---|
| Chromosome: | 20 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
60.7-60.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41616381 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.24E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #315280
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were first-lactation Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and GWAS were performed for milk production traits. A total of 42,444 SNPs were used for analysis. |
| Analysis: | WOMBAT was used in the formation of a genomic relationship matrix and estimation of variance components and multiple SNP effects. |
| Software: | MINITAB, WOMBAT, qqman in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Erdoğan M, Çinkaya S, Brenig B, Çelikeloğlu K, Demirtaş M, Sarıibrahimoğlu S, Tekerli M |
| Affiliation: | Department of Veterinary Biology and Genetics, Faculty of Veterinary, Afyon Kocatepe University, Afyonkarahisar, Türkiye |
| Title: | Genome-wide association studies for milk production traits and persistency of first calving Holstein cattle in Türkiye |
| Journal: | Frontiers in Veterinary Science, 2024, 11: 1461075 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #39512914
Add your comments
Note similar findings
Note contradictions
|
