Release 56
(Apr 24, 2025)

QTL 30786 Description:

 Trait Information
Trait name: Milk fat percentage Vertebrate Trait Ontology: Milk fat amount
Reported name: Milk fat percentage (EBV) Product Trait Ontology: Milk fat content
Symbol: FP Clinical Measurement Ontology: Milk fat percentage
 QTL Map Information
Chromosome:27
QTL Peak Location:57.65 (cM)
QTL Span:56.19-59.11 (cM)
36.2-36.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs208314235
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values5.18E-5
Dominance effect:n/a
Additive effect:n/a
Associated Gene:AGPAT6 (1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta))
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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    •  QTL Experiment in Brief
    Animals:Animals were German Holstein-Friesian bulls.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for EBV for milk fat percentage. A total of 44280 SNPs were used for analysis.
    Analysis:A variance components-based approach was used.
    Software:EMMAX, GCTA
    Notes: 
    Links:Edit

     Reference
    Authors:Wang X, Wurmser C, Pausch H, Jung S, Reinhardt F, Tetens J, Thaller G, Fries R
    Affiliation:Technische Universitaet Muenchen, Freising-Weihenstephan, Germany
    Title:Identification and dissection of four major QTL affecting milk fat content in the German Holstein-Friesian population
    Journal:PloS one, 2012, 7(7): e40711
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:EBV
    User inputs on reference #22792397
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    • Cite this Data:

    Animal QTLdb: QTL30786 was published in 2012, and was curated into QTLdb on 2014-10-06. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:30786

     

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