Release 56
(Apr 24, 2025)

QTL 30593 Description:

 Trait Information
Trait name: Conception rate Vertebrate Trait Ontology: Fertility trait
Trait details: sire conception rate Product Trait Ontology: n/a
Symbol: CONCRATE Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:23
QTL Peak Location:45.98 (cM)
QTL Span:45.98-45.98 (cM)
28.9-28.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109300808
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values0.046
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PPP1R11 (protein phosphatase 1, regulatory (inhibitor) subunit 11)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped for 29 SNPs in spermatogenesis genes and analyzed for sire conception rate.
    Analysis:A mixed linear model was used.
    Software:R software
    Notes: 
    Links:Edit

     Reference
    Authors:Li G, Peņagaricano F, Weigel K A, Zhang Y, Rosa G, Khatib H
    Affiliation:College of Animal Science and Technology, China Agricultural University, Beijing 100193, China
    Title:Comparative genomics between fly, mouse, and cattle identifies genes associated with sire conception rate
    Journal:Journal of dairy science, 2012, 95(10): 6122-9
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22921614
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  • Cite this Data:

    Animal QTLdb: QTL30593 was published in 2012, and was curated into QTLdb on 2014-10-01. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:30593

     

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