| QTL Map Information |
|---|
| Chromosome: | 8 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
85.9-85.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs377953295 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ROR2 (receptor tyrosine kinase like orphan receptor 2) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #301253
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein dairy cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and GWAS was performed for interdigital hyperplasia. A total of 45,232 SNPs were used for analysis. |
| Analysis: | Additive and dominant models were used. |
| Software: | GenomeStudio V2011.1, SVS 8.8.3, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang X, Swalve HH, Pijl R, Rosner F, Wensch-Dorendorf M, Brenig B |
| Affiliation: | Institute of Veterinary Medicine, University of Göttingen, Göttingen, Germany |
| Title: | Interdigital Hyperplasia in Holstein Cattle Is Associated With a Missense Mutation in the Signal Peptide Region of the Tyrosine-Protein Kinase Transmembrane Receptor Gene |
| Journal: | Frontiers in Genetics, 2019, 10: 1157 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #31798639
Add your comments
Note similar findings
Note contradictions
|
