| QTL Map Information |
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| Chromosome: | 21 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs137390083 |
| Peak: | |
| Lower, "Significant": | rs133202403 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Canadian Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using either the Illumina 95K SNP panel or 50K SNP panel. CNVs were identified and analyzed for association with reproduction and disease traits. A total of 2,490 CNV regions were used for analysis. |
| Analysis: | The general linear model was used. |
| Software: | PennCNV, blupf90+ |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Oliveira HR, Chud TCS, Oliveira GA Jr, Hermisdorff IC, Narayana SG, Rochus CM, Butty AM, Malchiodi F, Stothard P, Miglior F, Baes CF, Schenkel FS |
| Affiliation: | Department of Animal Sciences, Purdue University, West Lafayette, Indiana, USA; Centre for Genetic Improvement of Livestock, Department of Animal Biosciences, University of Guelph, Guelph, Ontario, Canada |
| Title: | Genome-wide association analyses reveals copy number variant regions associated with reproduction and disease traits in Canadian Holstein cattle |
| Journal: | Journal of dairy science, 2024, S0022-0302(24)00810-5 |
| Links: |
PubMed | Abstract | List all data
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